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Bioinformatics Analyst, UB Genomics & Bioinformatics Core

Job Details

Posting Details

Position Information

Fiscal Year
2023-2024

Position Title
Bioinformatics Analyst, UB Genomics & Bioinformatics Core

Classification Title
Programmer/Analyst (Project)

Department
UB Genomics and Bioinformatics

Posting Number
R240102

Posting Link https://www.ubjobs.buffalo.edu/postings/50297

Employer
Research Foundation

Position Type
RF Professional

Type
Full-Time

Appointment Term

Salary Grade
E.79

Posting Detail Information

Position Summary

The University at Buffalo, Department of UB Genomics and Bioinformatics is seeking candidates for the position of Bioinformatics Analyst. The Bioinformatics Analyst is responsible for supporting the ever-growing computational analysis needs of the Genomics and Bioinformatics Core. The Bioinformatics Analyst works directly with core laboratory staff in an effort to provide optimal next-generation sequencing results.

Specific responsibilities include:
  • Day-to-day processing of the immense data being generated from illumina based next-generation sequencing platforms;
  • Quality assurance, initial data processing, and storage of data generated;
  • Maintenance of core computational infrastructure;
  • Specialized downstream analysis for supporting projects and core initiatives;
  • Willingness to quickly adopt new technologies and analysis best practices;
  • Analysis of all types of genomic, epigenomic, and transcriptomic data generated by the core
  • Development and modification of computational algorithms to facilitate data analysis at UB; participating in manuscripts and grant applications,
  • Figure generation;
  • Custom data mining efforts
Outstanding Benefits Package
Working at UB comes with benefits that exceed salary alone. There are personal rewards including comprehensive health and retirement plan options. We also focus on creating and sustaining a healthy mix of work, personal and academic pursuit – all in an effort to support your work-life effectiveness. Visit our benefits website to learn about our benefit packages .

About The University at Buffalo
The University at Buffalo (UB) #ubuffalo is one of America’s leading public research universities and a flagship of the State University of New York system, recognized for our excellence and our impact. UB is a premier, research-intensive public university dedicated to academic excellence. Our research, creative activity and people positively impact the world. Like the city we call home, UB is distinguished by a culture of resilient optimism, resourceful thinking and pragmatic dreaming that enables us to reach others every day. Visit our website to learn more about the University at Buffalo .

As an Equal Opportunity / Affirmative Action employer, the University at Buffalo will not discriminate in its employment practices due to an applicant’s race, color, religion, sex, sexual orientation, gender identity, national origin and veteran or disability status.

Minimum Qualifications

The ideal candidate will be collaborative, self-directed and possess the following:
  • A bachelors degree in Bioinformatics or closely related field with 1-2 years experience and familiarity with common NGS data file formats (FastQ, BAM ). Education and experience equivalencies will be considered.
  • Knowledge of Illumina based sequencing platforms (NovaSeq, NextSeq500, MiSeq).
  • Proficiency in linux is essential as all workflows are in a linux cluster environment.
  • Proficiency in the R coding language with experience using RStudio and Bioconductor.
  • Hands on experience processing Next-Generation Sequencing data sets from raw data to alignment (Bowtie2/Hisat2 preferred), and quantification (Subread featureCounts).
  • Previous experience using the DESeq2 analysis package from RNA -Seq.
  • Background knowledge of wet bench techniques to aid in laboratory trouble shooting.
  • Outstanding communication and leadership skills, in interacting with both wet-lab and computational biologists.
Preferred Qualifications
  • A Masters degree in Bioinformatics or closely related field.
  • Experience in transcriptional analysis is strongly preferred.
  • Python coding skills strongly preferred (virtualenv, managing local packages).
  • Previous hands-on experience with wet bench assays a plus, but not required.
Physical Demands

Salary Range
$55,000 - $65,000

Additional Salary Information
The salary range reflects our good faith and reasonable estimate of the possible compensation at the time of posting, the role and associated responsibilities, and the experience, education, and training of the selected candidate.

Work Hours

Monday – Friday
37.5 hour work week, exact hours to be discussed

Campus
Downtown Campus

Posting Alerts

Special Instructions Summary

Is a background check required for this posting?
No

Background Check Notification

Contact Information

Contact's Name
Jonathan Bard

Contact's Pronouns

Contact's Title
Associate Director of Bioinformatics

Contact's Email
jbard@buffalo.edu

Contact's Phone
716-881-8966

Posting Dates

Posted
05/23/2024

Deadline for applicants
06/06/2024

Date to be filled

References

Number of references required
3

Reference Cutoff Date

Instructions to Applicant

For more information, click the "How to Apply" button.

Company

University at Buffalo

UB is New York’s largest public university, one of America’s leading research universities and a flagship in the SUNY system.

UB is a top 40 university in a top city in which to attend college, and with more than 1,300 acres across three unique campuses, there is always something new to explore. Regular shuttle service takes students between North Campus and South Campus, and the Downtown Campus is easily accessible by Metro Rail

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